Browse of TCMCG006C90780 protein

CDS

Accession Number	TCMCG006C90780
gbkey	CDS
Protein Id	XP_013680279.1
Location	join(6012550..6013431,6013642..6015006,6015096..6016875,6016967..6018213)
Gene	LOC106384901
GeneID	106384901
Organism	Brassica napus

Protein

Length	1757aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013824825.2
Definition	ATP-dependent RNA helicase DEAH12, chloroplastic-like [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Helicase domain-containing protein IBR domain-containing protein zinc finger protein-related
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03041        [VIEW IN KEGG]
KEGG_ko	ko:K12818        [VIEW IN KEGG]
EC	3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko03040        [VIEW IN KEGG] map03040        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003724        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004004        [VIEW IN EMBL-EBI] GO:0004386        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005730        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008026        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008186        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0070035        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAGAGTTCACTTCCTCCGGCCTACCGTGGAAGATCGGCGACTAATCGCCACCCATCTTTACCCTCAGCTTCATCTTCAACCAATTGTCGTAACTTCCGCTCTCCGCCGCTCAATCACCGACAATACCCTAGCTCCAGTTTCCCGCCAAATTACAGACGCGATCGGCCTCCGGCGACGCCGAATTTCATCGTCCAGCTTGTCCACCCGAGAACCCCCGCCGCCGAGCCGTCGCCGTCCTTCTCGGTTAGAAAGCAAGTGATCAGCACCCTCGCTTCGCTCTGCGGAATCCCGGAGGAATCCATCCACGTGCCGCAGTTCGGATGCATCGCCGGGAGTTTCAGTTTTCGCCAGTGGGTCGACGCGCTCTCCGCCGTCGTGGCGCTCTGGGAGTACCGTCTCCAGGGGAAAACCCTTTTAGTTCCCGAGCTGGTTGCTAATGTCACCGTCCCGTCAGACGTGGAGGAGCTTAGAGACAGGCTTCGTGGTCTCTTCTCGGGTCACGTGCTTTCGATCATGGACAACGGAGATTGCGTCAAGAAGGTGAGGGCAGAGATAGAGGAGAAGTCTCGTCAAGTTGAGTCCTTTTCTTCCAAAAGAGGTATCAATATTGAGGCTTTTGAGAGAAAGAAGGCTATTGAGGCGGAGAGAGACTTGGTTGTAAAGCGTCTTGAAGAGTTCAAGAATGGTATGAAGAGTATTGTGCGGTTTCTTGAAGGAAGAGATGGAGAAAAAGATGACGTGGCTGTGTTTAGTTTGGAAGGAGACTATGATTGGCCGCGTATTCATAGTTTGATCCGCAGGGAGTGTCGTAGGCTAGAGGATGGGTTGCCTATTTATGCTTACCGTCGTAATATTTTGAAGAGGATTCATGGCGAACAGGTAATGGTATTGATTGGAGAAACCGGTTCAGGGAAGAGCACTCAGTTAGTTCAGTTCCTTGCTGATTCCGGAGTTGCTGCTAGTGAATCAATCGTTTGCACACAGCCAAGGAAAATTGCTGCCTTGACATTGGCTGATCGAGTCAGAGAAGAAAGCAACGGTTGTTACGATGAAAGCTCTGTCCGCTGCACTCCAGCTTTCTCTTCCACCGAGGAGATTAGTTCCAAAGTCGTGTTCATGACTGATAACTGTCTGCTTCAACACTACATTAAAGACCGGAGCTTGCCTGGTGTTTCATGCGTTATTATTGACGAAGCTCATGAGAGAAGCTTGAACACGGACCTTCTGCTGGCGTTGCTTAAAGATCTGATGTGCAGAAGAATTGACTTAAGGCTTGTCATCATGTCTGCCACGGCGGATGCTTACCAGCTCTCGGACTACTTCTTTGGCTGTGGGATTCTTTGTGTCACCGGAAGGAACTTTCCGGTGGAGATTATTTATTCCCCTAGCGACGCAGAAGGGAGTTCTGGTACCGGACGTATTGCTCCGTATGCTGATGATGTTGTTAAGAAGGCAGTGGAAGTGCATAAAACAGAGAAAGAAGGAACCATCCTTGCGTTCTTGACTTCTCAAGCAGAGGTTGAATGGGCCTGCGAGAGGTTTATAGCTCCATCTGCAGTTGCTTTACCGTTGCATGGAAAGCTTTCCTTCGAGGAGCAGTTCAGGGTGTTCCAAAACCATCCTGGGAAACGAAAGGTGATCTTTGCCACGAATATTGCAGAGACCTCTCTGACTATCCCTGGTGTCAAGTATGTGATCGACTCCGGGATGGTGAAAGAGAGTAAATATGAACCTAGAACTGGTATGAGCATCCTCAGGGTTTGCCGTGTCAGTCAAAGCTCTGCTCGACAACGTGCTGGTCGTGCTGGAAGGACAGAGCCCGGAAGATGTTACAGACTCTACTCAAAGCACGAGTTTGAGTCGATGAATCTTAACCAGGAGCCTGAGATTCGGAGGGTCCATCTTGGTGTAGCGCTGTTGAGGATTCTTGCTCTGGGTGTAGACAACGTGGCGGATTTTGACTTTGTCGACGCTCCTGTCCCTGAAGCCATCGCAATGGCTGTGAAAAATCTTGTTCAGCTGGGTGCGGTAATTGAGAAGAATGGTGTTCTTGAGTTAACACAGGAAGGGCACTGTTTAGTCAAGCTTGGTCTGGAGCCGAAGCTTGGGAAGTTAATATTAGGCTGCTTCAGACACAGAATGGGCAAAGAGGGGATTGTTCTTGCTGCTGTCATGGCTAATGCTAGTAGTATATTCTGCAGAGTTGGCAGCCTCGATGATAAGATGAAAGCTGATTGCCTAAAGGTGCAATTCTGCAACCCTAATGGAGACCTGTTCACTCTTCTTTCGGTGTACAAAGAATGGGCATCTCTGCCGCGAGAGAGAAGAAATAAATGGTGCTGGGAGAATAGCCTAAATGCCAAATCAATGAGGAGATGTGAAGATACAGTCAAGGAGCTGGAGATATGCATTGAGAGAGAACTTTCTCTTGTGAGTCCAAGTTACTGGGTCTGGAACCCAACCGAGGGTAATAATAATAAACACGACAAGCGTTTGAAAACGGTTATACTTGCATCTCTCGCTGAAAACGTGGCGATGTACACTGGCTATGATCAGCTTGGGTACGAGGTGGCGTTGACTGGTCAGCAAGTCCAGTTGCATCCGTCGTGTTCATTGCTAGCGTTTGGACAGAAGCCAACTTGGGTTGTTTTCGGTGAGCTGCTATCAGTCGTCGACCAGTACTTGGTATGTGTAACTTCGTTCGATTTTGAGGCTTTGTCTCTGCTTGATCCACCTCCACCTTTTGATGCTTCTCATATGGATGAGTGGAGGCTCCGAGTGGAGAAGGTGGCTGGTTGTAGCAGCACTCTGCTAAAAAGGTTCTGTGGGAAATCTAACTGTGGTCTGGTTTCGATTGTTTCTCGTGCTAGGTCGCTTTGTGTGGATGAGAGGATTAGTATTCAAGTTGATATCGATCAGAATGAGATTCTACTGTATGCACCTCCGCACGACATGGAAAAAGTCTCGGCCCTGGTGAGCGATGCATTGGAGTGTGAAAAGAAGTGGATGCGTAACGAATGCTTGGAGAAGTATATATACCATGGCCGGGGACAAGTACCTATGGCACTGTTTGGTTCTGGTGCTCAGATAAAGCATCTTGAAGTTGATCAGAGATTCTTGACGGCCGATGTATTTTATTACGGCGACAGTTTCGTTGATGACAGAGAGCTTCTGAGGTTCCTGGAGAGGAAGATCGATGTGTGTATCTGCTCTATTCATAAGTTTGCTGGGAACAAGCAAGACTGTGATGAGAAGGACAAGTGGGGTAGGATAACCTTTCTCACTCCGGAATCTGCTATGAAGGCAACAGAGATTCAGAGATTTGATTTCAACGGATCGGTGCTTAAACTATTTCCATCGCTGGCAACTGGTGGGGGAGGAATGTTCAAGATGCCTTCATTCCCTTCTGTTACAGCTATGATTCGTTGGCCGCAAAGGGAGAGCACTGGCAGAGGCGTTCTTAAGTGCCCATCCGGTGATGTTCACAGCGTATTTAATGGGACCTCTGACATTGTGATAGGAACAAGATACGCCCGCTTTGAGACGGATCAAAGGTTCAGTGACTCAATCTTGATTACTAATATTGACTCAGGTCTTGTGGAAGCAGACGTTTTAGATGCTTTGGAGTTCTACACGGGGAGAACAGATTTGGAATTTTTCCTGTTGAGAAGAAAGAGCGTGCGGTGTCCACCTCCTACTGTCTGTGCAGATATGCTGCATAAGAGGATATTTGCGTGCATGTCATCGAGCAGTCCAGAGCCGAACTGCGTCCAAGTCAAAGTTTTTGAACCAAAAGAAACAGATTATTTCATGCGAGCGTTGATTACTTTTGATGGAAGATTACACTTGGAAGCCGCGAAAGCTTTGGAGGAGTTAGATGGAGAGGTGCTACCTGGATGCCTTTCATGGCAGAAGATCAAATGCGAGCAAAAGTTTCAGAGCTCCATAATCTGTCCTGCTTCTGTCTACAACATAGTCAAAAGACAACTGAATGCTAAGTTAACAAGCTTCGAGAGACAAAGAGGAGGTACTTGGCATCTGGAGCCAACACATGGTGGTGCTTACCGTGTTAGAATATCTGCTTATGCAACAAAACCCATCTCAGAGATGCGGAGATCTCTTGAAGAACTTGTAAGAGGAAGACCCATAAACCATCCAGGCCTAACCCCAAGGGTCTTGCAGCATCTCTCTTCCAGAGACGGTGTTATTCTGATGCGGAGGATCCAACACGAGACTGAAACGTACATTTTACTAGACAGGCACAGTCTCACAGTACGCATCTGTGGATCAGAAGAGAAGATCGCTGCGGCTGAGCAAGAACTGGTTCGGTCGCTTCTGGTCTATCACGAGAGGCAGCAGCTCGAAATCCGCCTCCGAGGTCCTCAGTTACGTCCTGACCTCATGAAGGAAGTTGTGAACCGGTTTGGTCCGGATCTCCAAGGTATCAAGGAGAAGGTAAACGGTGTGGATCTCAAGCTCAACACGCGGTACCATGTTATTCAGGTTCATGGGAGCGTGGAGATGAGGCAGGAAGTAGAAAAGATCGTCTACGAACTTGCACGGGAAGGTAGTGAACCGGGAGGAAAACCAGATGACATTGAAGTTGAATGCCCCATCTGCCTGTGTGAGGTTGATGATGGATACTCTCTAGAAGGATGCTCGCACCTCTTCTGCAAAGCTTGTTTGTTGGAACAGCTCGAGGCATCGATGAGAAACTTCGACGCGTTTCCCATACTTTGCTCTCACGCTGACTGTGGAGCTCCGATAGTACTCGCTGATATGAGAGCGCTCTTATCACAAGAGAAGCTAGACGAGCTCTTCAAAGCCTCCCTGTCCTCTTTTGTAACAACCAGCGATGGTAACTTCCGGTTCTGCTCCACTCCTGACTGCCCTTCCGTTTACCGCGTAGCTGTTGGTCCTCGAGAGTCAGGGGAGCCGTTCATCTGCGGAGCTTGTAACGCAGAGACGTGCAGAAGGTGCCACCTGGAGTATCACCCGTATATCACTTGCGAGAGGTACAAACTGTTTAAAGAAGATCCTGACATGTCGTTGAAAGACTGGGCGAAGGGGAAGAACGTGAAGGAGTGTCCGTTTTGCAAGTCGACGATTGAGAAATCTGAAGGGTGTAACCATCTGCTGTGTCGGTGTGGGAAGCATATCTGCTGGGTTTGCTTAGACTTCTTCACTCATCAAGAGCCTTGTTATGAGCATTTGAGAGCAGTCCATGGTGGAATAGGAATCTTCGATGAGCTCGGCATCCCCTTGCTTTGA

Protein:   MKSSLPPAYRGRSATNRHPSLPSASSSTNCRNFRSPPLNHRQYPSSSFPPNYRRDRPPATPNFIVQLVHPRTPAAEPSPSFSVRKQVISTLASLCGIPEESIHVPQFGCIAGSFSFRQWVDALSAVVALWEYRLQGKTLLVPELVANVTVPSDVEELRDRLRGLFSGHVLSIMDNGDCVKKVRAEIEEKSRQVESFSSKRGINIEAFERKKAIEAERDLVVKRLEEFKNGMKSIVRFLEGRDGEKDDVAVFSLEGDYDWPRIHSLIRRECRRLEDGLPIYAYRRNILKRIHGEQVMVLIGETGSGKSTQLVQFLADSGVAASESIVCTQPRKIAALTLADRVREESNGCYDESSVRCTPAFSSTEEISSKVVFMTDNCLLQHYIKDRSLPGVSCVIIDEAHERSLNTDLLLALLKDLMCRRIDLRLVIMSATADAYQLSDYFFGCGILCVTGRNFPVEIIYSPSDAEGSSGTGRIAPYADDVVKKAVEVHKTEKEGTILAFLTSQAEVEWACERFIAPSAVALPLHGKLSFEEQFRVFQNHPGKRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILRVCRVSQSSARQRAGRAGRTEPGRCYRLYSKHEFESMNLNQEPEIRRVHLGVALLRILALGVDNVADFDFVDAPVPEAIAMAVKNLVQLGAVIEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLAAVMANASSIFCRVGSLDDKMKADCLKVQFCNPNGDLFTLLSVYKEWASLPRERRNKWCWENSLNAKSMRRCEDTVKELEICIERELSLVSPSYWVWNPTEGNNNKHDKRLKTVILASLAENVAMYTGYDQLGYEVALTGQQVQLHPSCSLLAFGQKPTWVVFGELLSVVDQYLVCVTSFDFEALSLLDPPPPFDASHMDEWRLRVEKVAGCSSTLLKRFCGKSNCGLVSIVSRARSLCVDERISIQVDIDQNEILLYAPPHDMEKVSALVSDALECEKKWMRNECLEKYIYHGRGQVPMALFGSGAQIKHLEVDQRFLTADVFYYGDSFVDDRELLRFLERKIDVCICSIHKFAGNKQDCDEKDKWGRITFLTPESAMKATEIQRFDFNGSVLKLFPSLATGGGGMFKMPSFPSVTAMIRWPQRESTGRGVLKCPSGDVHSVFNGTSDIVIGTRYARFETDQRFSDSILITNIDSGLVEADVLDALEFYTGRTDLEFFLLRRKSVRCPPPTVCADMLHKRIFACMSSSSPEPNCVQVKVFEPKETDYFMRALITFDGRLHLEAAKALEELDGEVLPGCLSWQKIKCEQKFQSSIICPASVYNIVKRQLNAKLTSFERQRGGTWHLEPTHGGAYRVRISAYATKPISEMRRSLEELVRGRPINHPGLTPRVLQHLSSRDGVILMRRIQHETETYILLDRHSLTVRICGSEEKIAAAEQELVRSLLVYHERQQLEIRLRGPQLRPDLMKEVVNRFGPDLQGIKEKVNGVDLKLNTRYHVIQVHGSVEMRQEVEKIVYELAREGSEPGGKPDDIEVECPICLCEVDDGYSLEGCSHLFCKACLLEQLEASMRNFDAFPILCSHADCGAPIVLADMRALLSQEKLDELFKASLSSFVTTSDGNFRFCSTPDCPSVYRVAVGPRESGEPFICGACNAETCRRCHLEYHPYITCERYKLFKEDPDMSLKDWAKGKNVKECPFCKSTIEKSEGCNHLLCRCGKHICWVCLDFFTHQEPCYEHLRAVHGGIGIFDELGIPLL